GATE BT 2013 • Q24
NAT • 1 Mark
Section 2: General Biotechnology
Biomolecules, enzyme kinetics
Subtopic: Fundamentals of Biomolecules, enzyme kinetics
Question Statement:
Calculate the percentage sequence identity for the pairwise alignment given below. _______
H E L L O -
Y E L L O W
Official Answer Key:
66.5 to 66.7
Step-by-Step Solution & Explanation
### **Step-by-Step Solution & Mathematical Derivation (GATE BT 2013 Q.24)**
**1. Governing Concept & Definition**:
- **Topic**: Bioinformatics & Sequence Alignment Percentage Identity
- Percentage sequence identity is defined as:
$\% \text{Identity} = \frac{\text{Number of Identical Positions}}{\text{Length of Alignment (including gaps)}} \times 100\%$
**2. Detailed Step-by-Step Calculation**:
- **Given Alignment**:
- Alignment length $= 6$ positions (or matching length)
- Identical matching residues $= 4$ out of $6$:
$\% \text{Identity} = \frac{4}{6} \times 100\% = \frac{2}{3} \times 100\% \approx 66.67\%$
**3. Final Answer**:
- **Calculated Value**: **66.7%**
- **Official GATE Accepted Range**: **66.5 to 66.7**
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